Data Set Deconvolution Search Engine Protein Accessions Truncations Proteoforms PrSMs PXD026123 FLASHDeconv TopMG 102 228 303 1477 FLASHDeconv TopPIC 209 731 1799 7476 PXD026159 FLASHDeconv TopMG 24 94 108 472 FLASHDeconv TopPIC 55 303 801 4408 Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259. Table 2. Results from the batch application of the default workflow setting (FLASHDeconv + TopPIC) in TopdownApp plus an additional workflow setting using (FLASHDeconv + TopMG) for datasets PXD026123 and PXD0261259.