S/N
Sample
Source
Grade
Library Preparation
Library Selection
Library layout
Sequencing Platform
Instrument Model
Average Mean reads Pair-end length (bp)
Reference
1. Tissue UCC Ta/T1/T2-4/CIS ScriptSeq cDNA Paired-end Illumina Illumina HiSeq 2000 101 + 7 + 101 Hedegaard et al. (2016)
2. Tissue UCC N/A Ribo-Zero Magnetic Gold Kit (Illumina, USA) and the NEBNext® Ultra™ RNA Library Prep Ki cDNA Paired-end Illumina HiSeqX N/A Li et al. (2018)
3. Tissue UCC N/A TruSeq Stranded mRNA Lib Prep Kit cDNA Paired-end Illumina NextSeq 500 72 Maeda et al. (2018)
4. Cell Urine N/A Ovation RNA Seq System V2 kit cDNA Paired-end/ Single Illumina Illumina HiSeq 2000 N/A Sin et al. (2017)
5. Cell N/A N/A TruSeq Stranded Total RNA kit cDNA N/A Illumina Illumina HiSeq 2500 N/A Shen et al. (2015)
6. Tissue N/A N/A RiboZero rRNA Removal Kit cDNA N/A Illumina HiSeq2000 N/A Li et al. (2017)
7. Tissue UCC N/A TruSeq cDNA Pair-end Illumina Genome Analyzer IIx (GAIIx) 380 Zhang et al (2014)
8. Tissue/cell UC T1, T2–T4a, N0–3, M0–1 DNA/RNA AllPrep kit (QIAGEN)/ mirVana miRNA isolation kit cDNA, miRNA N/A Illumina Illumina HiSeq 2500 76 Robertson etal (2017)