2.3 | Structure of protein assemblies
Previous benchmarking studies, for example (29), had suggested that deep learning methods, particularly AlphaFold2, would also be effective for protein assemblies, and so this category is of especial interest. The analysis was conducted in close collaboration with our colleagues at CAPRI (Critical Assessment of PRedicted Interactions (5)). Two assessments were performed, one by CASP (11) and one by CAPRI (30), providing two views. Here we summarize the main conclusions from the CASP15 assessment.